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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015885778.1_cds_XP_016439858.1_35373
CDS Infomation

[gene=LOC107765699] [db_xref=GeneID:107765699] [protein=CSC1-like protein ERD4] [protein_id=XP_016439858.1] [location=join(11902..12172,13776..13921,14177..15294,15693..15948,16425..16805)] [gbkey=CDS]
Sequence

ATGAATTTTTCATCATTCTTGACGTCTTTAGGAACTTCCTTTGTAATATTTGTGGTTTTG
ATGCTGTTATTCACATGGCTCTCAAGAAAACCAGGGAATGTTGAGGTATACTATCCAAAT
CGGATCCTCAAAGGTATGAACCCGGTTGAAGGCGGGTACATGACCCGGAACCCGTTTTCT
TGGATCCGAGAAGCTATGTCCTCATCTGAAACAGATATCATCAACATGTCTGGAGTTGAT
ACTGCTGTCTACTTTGTTTTCCTTGGCACTGCCTTGGGAATATTTGTCTTCTCCGGCGTT
GTACTGCTGCCTGTACTTCTACCAGTTGCTTCAACTGATCATAGTATAAAGGCAGCCAAT
ACCACCAGCAAGGGGACTTTCAATGAACTTGATAGGTTATCTATGGGGCACGTTGGCAAT
TCAGGACCGCGGTTGTGGGCATTTATAGTTGCAACATATTGGGTTTCTGTTGTTACTTAC
TTCCTTTTATGGAGAGCATACAAGCATGTTACAGAATTGAGAGCTAAAGCTCTTATGTCT
CCAGAAATCAGAGCCGATCAATTTGCTATTCTTGTCAGGGATATTCCTCCCACCTCTGTC
GGTCAAAGTAAAAAAGAGCAGATAGATTCATTCTTTAGAGCAATCTACCCCGATACATTT
TATCGGTCAATGGTGGTGACGGACAATAAGGAGGTGAACAAAATTTATGAAGAGTTGGAA
GGGTACAAAAAGAAGCTTGAACGTGCTGAAGCCATCTATGCGGAGTCGAAGAAAACAAAT
CCTGATGCACTAAAACCCTTGCATAAAACTGGTTTCCTTGGTATTGTTGGTGAAAAGGTA
GATTCAATTGAATTCTACAATGATAAGATTAAGGAATTGATCCAACAGTTAGAAGTTGAA
CAGAAGGTGACTCTCAAAGAGAAACAGCAATCTTCTGCGCTGGTCTTTTTCAACAGCAGA
GTCGCTGCAGCTTCTGCATTACAGAATTTACATGCCCCTATAGTTGACAGGTGGACTGTT
ATAGATGCTCCAGAACCACGTCAGTTGATTTGGACTAATCTTTCGAAAACGTTTTATGTG
AGAATAATTCGGCAGTATGTTGTGTATGTTGTTGTGTTTTTGACCATATTCTTTTATATG
ATTCCGATTGGGTTCATCTCGGCATTAACAACTCTAGACAATCTGGTGAAGCTTCTCCCG
TTTTTGAAACCTGTTGTGAGTCAGAAGGCAATCAAGACTGTGCTAGAAGCTTATTTGCCT
CAGCTTGCGCTCATCATATTTTTGGCTTTGTTGCCAAAGTTTCTTATGTTTCTATCCAAA
GCAGAGGGCATCCCTTCAGAAAGCCATGTTACAAGAGCTGCTTCAGGGAAATATTTTTAT
TTCTCAGTGCTGAATGTATTTATTGGTGTTACTCTCGCTGGAACTCTACTCGGTGCCTTC
AAGAGCATTGAGAAAGATCCCAACTCTATTTTTCGTGTATTGGCAGAAAGCCTTCCACAG
AATGCAACTTTCTTCTTGACCTTTGTGGCTTTGAAGTTCTTTGTCGGCTATGGACTGGAG
CTGTCCAGGATAGTTCCTCTAATCATATTCCATCTCAAGAAGAAGTATCTGTGCAAAACT
GAAGCTGAGATAAAAGAGGCTTGGGCCCCTGGTGATCTAGGCTATGCAACTCGATTTCCC
AGTGATATGCTGATTATGACGATTGTCCTATGCTATTCCGTCATAGCTCCAATTATTTTA
CCGTTTGGAGTCGTTTACTTCGGTCTGGGCTGGCTTCTTCTACGGAATCAGGCACTGAAA
GTGTACGTTCCTTCATTCGAGAGCTACGGAAGAATGTGGCCGCATATTCACACGCGCATG
TTAGCTACCTTGATTTTGTATCAAGTTACCATGTGTGGTTACTTTGGAATTAAAACGTTC
GCGCCTACTCCAGTTCTTTTCCCACTTCCAATATTCTCCCTTATCTTCGCGTTCATTTGT
CAGAAGAAGTTCCGTCGGTTCTTTGAATCTCCAGCCCTCGAAGTCGTCTCTCACGAACTA
AAAGAAATCCCGAACATGGATATTGTGTTCAGATCTTTCATTCCACCATGCTTGAGTGCA
GGGAAGTCCGACGACCATCAGTTTGAGGACGCTTTATCTCACGTATCAAAAACAGGTTCC
TCTTCAGTATGA

Peptide Sequence

PEP ID

XP_016439858.1
PEP Infomation

PREDICTED: CSC1-like protein ERD4 [Nicotiana tabacum]
Sequence

MNFSSFLTSLGTSFVIFVVLMLLFTWLSRKPGNVEVYYPNRILKGMNPVEGGYMTRNPFS
WIREAMSSSETDIINMSGVDTAVYFVFLGTALGIFVFSGVVLLPVLLPVASTDHSIKAAN
TTSKGTFNELDRLSMGHVGNSGPRLWAFIVATYWVSVVTYFLLWRAYKHVTELRAKALMS
PEIRADQFAILVRDIPPTSVGQSKKEQIDSFFRAIYPDTFYRSMVVTDNKEVNKIYEELE
GYKKKLERAEAIYAESKKTNPDALKPLHKTGFLGIVGEKVDSIEFYNDKIKELIQQLEVE
QKVTLKEKQQSSALVFFNSRVAAASALQNLHAPIVDRWTVIDAPEPRQLIWTNLSKTFYV
RIIRQYVVYVVVFLTIFFYMIPIGFISALTTLDNLVKLLPFLKPVVSQKAIKTVLEAYLP
QLALIIFLALLPKFLMFLSKAEGIPSESHVTRAASGKYFYFSVLNVFIGVTLAGTLLGAF
KSIEKDPNSIFRVLAESLPQNATFFLTFVALKFFVGYGLELSRIVPLIIFHLKKKYLCKT
EAEIKEAWAPGDLGYATRFPSDMLIMTIVLCYSVIAPIILPFGVVYFGLGWLLLRNQALK
VYVPSFESYGRMWPHIHTRMLATLILYQVTMCGYFGIKTFAPTPVLFPLPIFSLIFAFIC
QKKFRRFFESPALEVVSHELKEIPNMDIVFRSFIPPCLSAGKSDDHQFEDALSHVSKTGS
SSV

Transcript Sequence

Gene sequence data has not been registered.